Hiking With A Field Microscope

Copyright © 2005, Wayne Lanier

Salt Marsh Mysteries

TABLE OF CONTENTS

Introduction

Secrets of a San Francisco Deck Garden

Giant Bacteria Found in Golden Gate Park Flowers...!

Cryptobiotic Soil Unearthed in Utah

Revealing Films of Life in a Cliff-side Seep

A Hard Life Out in the Salt Flats

Vernal Pool Fantasies

Relax in California Tide Pool

Salt Marsh Mysteries

The Big Heat

Beneath the Tufas in Mono Lake

What is a Field Microscope?

Getting Out Into the Field

Little-known Techniques of Field Photomicrography

Candid Camera

As a volunteer, helping with the Marin County Coastwalk, I found myself with a little time in the late afternoon and walked along the Tomales Bay shore behind the Clifford Conly Research Center.  As usual, I was carrying my field microscope.


And, indeed, I turned east off the path just before the bridege and walked along the Slough.


Color is everything in this game.  As soon as I saw the red mud I knew my quarry was near.  I leaned out over the pickle weed and took a sample.


I hit immediate paydirt...  Here we see four of the organisms that constitute this mud flat community.


The next photomicrograph is linked to a QuickTime movie of Dinoflagellates.  If you have a Quicktime player installed on your computer, you can view the short film by clicking on the little camera symbol.   If you do not have QuickTime, you can download a  player for free at this web site.   Depending on the speed of your Internet connection, the QuickTime movie may take a moment to load.  Be patient.  When you are through viewing the little film, use the <BACK> button your browser to return to this page.


Moving in for a higher magnification...


These dinoflagellates define the mud flat community of this slough in the sense that they are the dominant organism.

Similar communities are found in every mud flat and stagnant slough around the San Francisco area, from Tomales Bay in the north to the Don Edwards San Francisco Bay National Wildlife Reserve in the south near Fremont.  In every such community I have examined, one species of dinoflagellate or another is the defining dominant member.


A minority member of the dinoflagellates in this community is shown in the photomicrograph below.


A similar dinoflagellate is found in the Dead Sea.  There, it is actually harvested for production of beta-carotene.


The next most frequent members of this community are the cynobacteria.  Similar cyanobacteria are found in most of the mud flat communities around San Francisco.


Viewing the cyanobacteria at higher magnification shows some of its structure.  Oscillatoria is a very common species of cyanobacteria, so guessing that the large bacterial filament is probably Oscillatoria is reasonable.  It is not certain, however, because identification of any microorganism from appearance is a risky business.  Notice that this photomicrograph is linked to a short movie, also.  Clicking on the little camera symbol will load the film.  Loading time is dependent on the speed of your Internet link.  When you have viewed the movie, use the <BACK> button on your browser to return to this page.


Both of photomicrographs were made at about 800X magnification.


<>Text...14


The next major group of mud flat organisms are the diatoms.


Some are lacy...


Some diatoms are skinny...


Some diatoms are chubby...


There is a brief movie of the diatom shown in the photomicrograph below.  To view it, click on the image of the little camera.  To return to this page, use the <BACK> button of your browser.


The next photomicrograph is linked to an entertaining movie.  This is one I recommend.  Just click on the little camera image.  It may take awhile to load, but it is worth it.  When done, use the <BACK> button to return to this page

I calculated the volumes of these two diatoms.  Assuming that the weight is directly proportional to volume, the big diatom is 96-times heavier than the little one.  If a person of average weight were swimming, this would be the equivalent of pushing on a 7.5-ton boat.


The next diatom species is simply weird...!


Seeing one of these diatoms is rare, usually they look like this...


Think of the next series of photomicrographs as a slow-motion movie...


and...


and...


then...


Here is another short movie I recommend.  It shows the diatoms unfolding and extending.  Click on the little camera.  Return with your <BACK> button.


More about diatoms.


This was taken sequentially.






Finally, one last odd diatom.


The "glass" valves are like little pill boxes.




If you are not worn out waiting for little movies to load, this is a good example of a ciliate.  The rows of cilia show clearly in the movie.


And we end with the nematode member of the mud flat community.


End of page.